Difference between revisions of "Old Users Guide:Attaching the sensitive detectors"
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Revision as of 15:09, 25 January 2018
Once a model has been defined for the scanner through the construction of a system (see Users Guide V8.1:Defining a system), the next step is to attach a sensitive detector (SD) to some volumes of the geometry. As in any Geant4 simulation, these sensitive detectors are used to store information regarding interactions of a particle in the matter (hits) using information from the steps occuring along the particle track. A hit is a snapshot of a physical interaction of a track in a sensitive region of the detector. Figure 5.1 illustrates these notions. Hits contain various pieces of information associated to a step object, such as the energy deposition of a step, geometrical information, position and time of a step, etc.
GATE records and stores information related to the hits only for those volumes that are attached to a sensitive detector. All information regarding the interactions occuring in non-sensitive volumes is lost.
The crystalSD is used to record information regarding interactions taking place inside the volumes belonging to a scanner for instance (crystals or collimators) : energy deposition, positions of interaction, origin of the particle (emission vertex), type of interaction (name of the physical processes involved), etc.
A crystalSD can be attached only to those volumes that belong to a given system. Once a crystalSD has been attached, it is considered as attached to this system. This sensitive detector can be attached using the command attachCrystalSD. These volumes are essentially meant to be scintillating elements (crystals) but can also be attached to non-scintillating elements such as collimators, shields or septa.
Below is an example of command lines that should be included in a macro using the crystalSD. These command lines must be inserted after the description of the attachment to the system:
The first command is used to attach the scintillation crystal to the detection levelcrystal of the SPECThead system.
Then, the second command attaches the crystalSD to the volume representing the scintillation crystal in the geometry.
The phantomSD plays a crucial role in GATE simulations, as it is used to record information regarding Compton and Rayleigh interactions taking place in the volumes before the detection in the scanner system (e.g., for a SPECT camera, these volumes can be the table, phantom, and collimator, in which it can be relevant to retrieve information about Compton and Rayleigh interactions). These data can then be used to estimate whether a photon reaching a detector is a direct or a Compton-scattered photon. Thus, in PET, the phantomSD is currently the only way to discriminate scattered from true coincidences. To simulate low energy X-ray acquisitions (for example mammography acquisitions from 7 to 28 keV), information concerning Rayleigh interactions is significant.
Using this type of sensitive detector, it is possible to retrieve two pieces of information related to the hits:
- The number of Compton and Rayleigh interactions occuring in all the volumes attached to the phantomSD : nPhantomCompton and nPhantomRayleigh. These pieces of information are also available for the crystalSD with the variables nCrystalCompton and nCrystalRayleigh. It is impossible to attach both sensitive detectors to the same volume.
- The last volume attached to the phantomSD in which a Compton or a Rayleigh interaction occured : compVolName and RayleighVolName.
IMPORTANT: To retrieve data output information regarding hits occuring in the phantomSD (nPhantomCompton and compVolName), a crystalSD has to be defined in the simulation. Otherwise, data output variables will be created but will be empty. When all these conditions are satisfied, any interaction taking place within the field of view (FOV) of the scanner is automatically recorded by the phantomSD, so that the number of Compton interactions for each photon can be accurately computed.
This procedure does not take into account Compton interactions taking place within the detectors, so that inter-crystal cross-talk via Compton interactions is not detected. Here is an example of command-lines that should be included within the macro in order to use the phantomSD. These command lines must be inserted after the description of the attachment to the system. First, commands are used to attach the scattering volumes to the detection level base of the SPECThead system:
/systems/SPECThead/base/attach FOV /systems/SPECThead/base/attach head /systems/SPECThead/base/attach body
Then, we can attach the phantomSD to the volumes representing the scattering volumes in the geometry :
/FOV/attachPhantomSD /head/attachPhantomSD /body/attachPhantomSD
Finally, the last commands are used to attach the scintillation crystal to the detection level crystal of the SPECThead system and to attach the crystalSD to the volume representing the scintillation crystal in the geometry.
In the case of a voxellized matrix: Previous commands to attach sensitive detectors are used for the volumes created using the geometry commands of GATE (see Users Guide V7.2:Defining a geometry). In order to record the same information concerning the interactions occuring in a voxellized matrix, see Users Guide V7.2:Voxelized_Source_and_Phantom.